harsh3466

First, before this rather large infodump, I want to thank anyone that takes the time to read through this to offer any information or advice on trying to resolve this issue.

Here’s the issue I’ve been struggling with.

I keep getting this error on my server:

INFO: task txg_sync:1615 blocked for more than 241 seconds.
Tainted: P           O      5.15.0-112-generic #122-Ubuntu

Background:

I’ve got a homeserver running Ubuntu server 22.04 (no DE) with an Intel Core i7-6700K CPU @ 4.00GHz, 32GB RAM, and two ZFS pools. The OS is installed on its own 128GB SSD, and the two ZFS pools consist of a 128GB SSD in its own pool for the server’s cache, and a 4x8TB HDD RAIDZ1 pool that is my main data/server storage (much more detailed system info below).

I have a bunch of services running in Docker containers, and overall everything is great, except for when that error rears up.

The error seems random, but occurs most reliably, but not consistently, when I’m trying to write larger media files to the RAIDZ1 pool. I am aware that this an IOPS issue, but so far I have not been able to diagnose it.

Back in February, I was carrying some boxes down to the basement where the server rack is, and I accidentally kicked a stool into the server which knocked the shit out of it (it’s a tower pc that I built back in 2016 or 2017 and repurposed in 2020ish to server use). When I turned on the monitor it was in total panic mode. The screen was gibberish colors and flickering madness.

I had to force shutdown with the power button. I waited a good couple of minutes, and on reboot, everything seemed fine. Until I noticed the new txg_sync error a week or so later when I went down to add some media to the server.

After a lot of searching and reading that didn’t turn up pertinent info, I ran across a comment that said this error is almost always hardware related. Like a loose connection or a failing disk or something. With me having knocked the shit out of the server, I realized I should have opened the case up and checked it all out. I shut it down, opened it up, and found a loose connector on the motherboard. I reseated it, checked everything else (though not thoroughly enough, which we’ll get to), and rebooted hoping I had found the problem.

It seemed fine for a bit, but no luck. The error returned.

More searching with no luck, and then about a month ago, a friend he suggested I check all the SATA connectors by disconnecting each one and reconnecting to insure a good, solid connection. I had previously checked if they were seated when I opened the case, but didn’t disconnect and reconnect. While doing this, I found a SATA cable with a busted clip and thought again I had found the problem. I replaced the cable, and went about a week before the error resurfaced.

It continues to occur, as I mentioned inconsistently. Most reliably, but not always, when writing data to the RAIDZ1 pool.

I have run a thorough memtest, and there were no errors or issue with the RAM, and as far as I can tell, there are no errors/failures with the HDDs.

Below is a lot of system info, and an example of what I find in dmesg for the error.

System Info

OS & Kernel

Ubuntu 22.04.4 LTS
Linux [redacted user] 5.15.0-113-generic #123-Ubuntu SMP Mon Jun 10 08:16:17 UTC 2024 x86_64 x86_64 x86_64 GNU/Linux

CPU

Architecture:           x86_64
  CPU op-mode(s):       32-bit, 64-bit
  Address sizes:        39 bits physical, 48 bits virtual
  Byte Order:           Little Endian
CPU(s):                 8
  On-line CPU(s) list:  0-7
Vendor ID:              GenuineIntel
  Model name:           Intel(R) Core(TM) i7-6700K CPU @ 4.00GHz
    CPU family:         6
    Model:              94
    Thread(s) per core: 2
    Core(s) per socket: 4
    Socket(s):          1
    Stepping:           3
    CPU max MHz:        4200.0000
    CPU min MHz:        800.0000
    BogoMIPS:           7999.96
    Flags:              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dno wprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid mpx rdseed adx smap clflushopt intel_pt xsaveopt xsavec xgetbv1 xsaves dtherm ida arat pln pts hwp hwp_notify hwp_act_window hwp_epp md_clear flush_l1d arch_capabilities
Caches (sum of all):    
  L1d: 128 KiB (4 instances)
  L1i: 128 KiB (4 instances)
  L2:  1 MiB (4 instances)
  L3:  8 MiB (1 instance)
NUMA:                   
  NUMA node(s):      1
  NUMA node0 CPU(s): 0-7
Vulnerabilities:        
  Gather data sampling: Vulnerable: No microcode
  Itlb multihit:        KVM: Mitigation: VMX unsupported
  L1tf:                 Mitigation; PTE Inversion
  Mds:                  Mitigation; Clear CPU buffers; SMT vulnerable
  Meltdown:             Mitigation; PTI
  Mmio stale data:      Mitigation; Clear CPU buffers; SMT vulnerable
  Retbleed:             Mitigation; IBRS
  Spec rstack overflow: Not affected
  Spec store bypass:    Mitigation; Speculative Store Bypass disabled via prctl and seccomp
  Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
  Spectre v2:           Mitigation; IBRS; IBPB conditional; STIBP conditional; RSB filling; PBRSB-eIBRS Not
                         affected; BHI Not affected
  Srbds:                Mitigation; Microcode
  Tsx async abort:      Mitigation; TSX disabled

RAM

Memory Device
        Array Handle: 0x004A
        Error Information Handle: Not Provided
        Total Width: 64 bits
        Data Width: 64 bits
        Size: 8 GB
        Form Factor: DIMM
        Set: None
        Locator: DIMM_A2
        Bank Locator: BANK 1
        Type: DDR4
        Type Detail: Synchronous
        Speed: 2133 MT/s
        Manufacturer: Corsair
        Serial Number: 00000000
        Asset Tag: 9876543210
        Part Number: CMK16GX4M2A2400C16  
        Rank: 2
        Configured Memory Speed: 2133 MT/s
        Minimum Voltage: Unknown
        Maximum Voltage: Unknown
        Configured Voltage: 1.2 V

Handle 0x004D, DMI type 17, 40 bytes
Memory Device
        Array Handle: 0x004A
        Error Information Handle: Not Provided
        Total Width: 64 bits
        Data Width: 64 bits
        Size: 8 GB
        Form Factor: DIMM
        Set: None
        Locator: DIMM_B1
        Bank Locator: BANK 2
        Type: DDR4
        Type Detail: Synchronous
        Speed: 2133 MT/s
        Manufacturer: Corsair
        Serial Number: 00000000
        Asset Tag: 9876543210
        Part Number: CMK16GX4M2A2400C16  
        Rank: 1
        Configured Memory Speed: 2133 MT/s
        Minimum Voltage: Unknown
        Maximum Voltage: Unknown
        Configured Voltage: 1.2 V

Handle 0x004E, DMI type 17, 40 bytes
Memory Device
        Array Handle: 0x004A
        Error Information Handle: Not Provided
        Total Width: 64 bits
        Data Width: 64 bits
        Size: 8 GB
        Form Factor: DIMM
        Set: None
        Locator: DIMM_B2
        Bank Locator: BANK 3
        Type: DDR4
        Type Detail: Synchronous
        Speed: 2133 MT/s
        Manufacturer: Corsair
        Serial Number: 00000000
        Asset

Disks

NAME                      MAJ:MIN RM   SIZE RO TYPE MOUNTPOINTS
loop0                       7:0    0  63.9M  1 loop /snap/core20/2264
loop1                       7:1    0  63.9M  1 loop /snap/core20/2318
loop2                       7:2    0    87M  1 loop /snap/lxd/27948
loop3                       7:3    0    87M  1 loop /snap/lxd/28373
loop4                       7:4    0  38.7M  1 loop /snap/snapd/21465
loop5                       7:5    0  38.8M  1 loop /snap/snapd/21759
sda                         8:0    0 223.6G  0 disk 
├─sda1                      8:1    0     1M  0 part 
├─sda2                      8:2    0     2G  0 part /boot
└─sda3                      8:3    0 221.6G  0 part 
  └─ubuntu--vg-ubuntu--lv 253:0    0   100G  0 lvm  /
sdb                         8:16   0 223.6G  0 disk 
├─sdb1                      8:17   0 223.6G  0 part 
└─sdb9                      8:25   0     8M  0 part 
sdc                         8:32   0   7.3T  0 disk 
├─sdc1                      8:33   0   7.3T  0 part 
└─sdc9                      8:41   0     8M  0 part 
sdd                         8:48   0   7.3T  0 disk 
├─sdd1                      8:49   0   7.3T  0 part 
└─sdd9                      8:57   0     8M  0 part 
sde                         8:64   0   7.3T  0 disk 
├─sde1                      8:65   0   7.3T  0 part 
└─sde9                      8:73   0     8M  0 part 
sdf                         8:80   0   7.3T  0 disk 
├─sdf1                      8:81   0   7.3T  0 part 
└─sdf9                      8:89   0     8M  0 part 

ZFS

version

zfs-2.1.5-1ubuntu6~22.04.4
zfs-kmod-2.1.5-1ubuntu6~22.04.3

list

NAME        SIZE  ALLOC   FREE  CKPOINT  EXPANDSZ   FRAG    CAP  DEDUP    HEALTH  ALTROOT
srvrcache   222G  13.8G   208G        -         -    17%     6%  1.00x    ONLINE  -
srvrpool   29.1T  17.5T  11.6T        -         -     1%    60%  1.00x    ONLINE  -

status

pool: srvrcache
 state: ONLINE
status: Some supported and requested features are not enabled on the pool.
        The pool can still be used, but some features are unavailable.
action: Enable all features using 'zpool upgrade'. Once this is done,
        the pool may no longer be accessible by software that does not support
       the features. See zpool-features(7) for details.
  scan: scrub repaired 0B in 00:00:35 with 0 errors on Sun Jun  9 00:24:36 2024
config:

        NAME        STATE     READ WRITE CKSUM
        srvrcache   ONLINE       0     0     0
          sdb       ONLINE       0     0     0

errors: No known data errors

 pool: srvrpool
 state: ONLINE
status: Some supported and requested features are not enabled on the pool.
        The pool can still be used, but some features are unavailable.
action: Enable all features using 'zpool upgrade'. Once this is done,
        the pool may no longer be accessible by software that does not support
        the features. See zpool-features(7) for details.
  scan: scrub repaired 0B in 11:41:27 with 0 errors on Sun Jun  9 12:05:31 2024
config:

        NAME        STATE     READ WRITE CKSUM
        srvrpool    ONLINE       0     0     0
          raidz1-0  ONLINE       0     0     0
            sdd     ONLINE       0     0     0
            sde     ONLINE       0     0     0
            sdf     ONLINE       0     0     0
            sdc     ONLINE       0     0     0

errors: No known data errors

iostat

capacity     operations     bandwidth 
pool        alloc   free   read  write   read  write
----------  -----  -----  -----  -----  -----  -----
srvrcache   13.8G   208G      0     22  48.0K   291K
  sdb       13.8G   208G      0     22  48.0K   291K
----------  -----  -----  -----  -----  -----  -----
srvrpool    17.5T  11.6T     33     59  2.14M  1.03M
  raidz1-0  17.5T  11.6T     33     59  2.14M  1.03M
    sdd         -      -      8     15   554K   275K
    sde         -      -      7     13   536K   252K
    sdf         -      -      8     15   562K   275K
    sdc         -      -      8     14   539K   252K
----------  -----  -----  -----  -----  -----  -----

PCI

00:00.0 Host bridge: Intel Corporation Xeon E3-1200 v5/E3-1500 v5/6th Gen Core Processor Host Bridge/DRAM Registers (rev 07)
00:01.0 PCI bridge: Intel Corporation 6th-10th Gen Core Processor PCIe Controller (x16) (rev 07)
00:02.0 VGA compatible controller: Intel Corporation HD Graphics 530 (rev 06)
00:14.0 USB controller: Intel Corporation 100 Series/C230 Series Chipset Family USB 3.0 xHCI Controller (rev 31)
00:16.0 Communication controller: Intel Corporation 100 Series/C230 Series Chipset Family MEI Controller #1 (rev 31)
00:17.0 SATA controller: Intel Corporation Q170/Q150/B150/H170/H110/Z170/CM236 Chipset SATA Controller [AHCI Mode] (rev 31)
00:1b.0 PCI bridge: Intel Corporation 100 Series/C230 Series Chipset Family PCI Express Root Port #17 (rev f1)
00:1c.0 PCI bridge: Intel Corporation 100 Series/C230 Series Chipset Family PCI Express Root Port #1 (rev f1)
00:1d.0 PCI bridge: Intel Corporation 100 Series/C230 Series Chipset Family PCI Express Root Port #9 (rev f1)
00:1f.0 ISA bridge: Intel Corporation Z170 Chipset LPC/eSPI Controller (rev 31)
00:1f.2 Memory controller: Intel Corporation 100 Series/C230 Series Chipset Family Power Management Controller (rev 31)
00:1f.3 Audio device: Intel Corporation 100 Series/C230 Series Chipset Family HD Audio Controller (rev 31)
00:1f.4 SMBus: Intel Corporation 100 Series/C230 Series Chipset Family SMBus (rev 31)
00:1f.6 Ethernet controller: Intel Corporation Ethernet Connection (2) I219-V (rev 31)
01:00.0 VGA compatible controller: NVIDIA Corporation GP106 [GeForce GTX 1060 3GB] (rev a1)
01:00.1 Audio device: NVIDIA Corporation GP106 High Definition Audio Controller (rev a1)
03:00.0 USB controller: ASMedia Technology Inc. ASM1142 USB 3.1 Host Controller

dmesg

[321540.060243] INFO: task txg_sync:1615 blocked for more than 120 seconds.
[321540.060330]       Tainted: P           O      5.15.0-112-generic #122-Ubuntu
[321540.060408] "echo 0 > /proc/sys/kernel/hung_task_timeout_secs" disables this message.
[321540.060495] task:txg_sync        state:D stack:    0 pid: 1615 ppid:     2 flags:0x00004000
[321540.060498] Call Trace:
[321540.060500]  <TASK>
[321540.060502]  __schedule+0x24e/0x590
[321540.060509]  schedule+0x69/0x110
[321540.060512]  schedule_timeout+0x87/0x140
[321540.060515]  ? zio_issue_async+0x12/0x20 [zfs]
[321540.060653]  ? __bpf_trace_tick_stop+0x20/0x20
[321540.060657]  io_schedule_timeout+0x51/0x80
[321540.060661]  __cv_timedwait_common+0x12c/0x170 [spl]
[321540.060669]  ? wait_woken+0x70/0x70
[321540.060672]  __cv_timedwait_io+0x19/0x20 [spl]
[321540.060679]  zio_wait+0x116/0x220 [zfs]
[321540.060799]  dsl_pool_sync+0xb6/0x400 [zfs]
[321540.060890]  ? __mod_timer+0x214/0x400
[321540.060894]  spa_sync_iterate_to_convergence+0xe0/0x1f0 [zfs]
[321540.060997]  spa_sync+0x2dc/0x5b0 [zfs]
[321540.061098]  txg_sync_thread+0x266/0x2f0 [zfs]
[321540.061206]  ? txg_dispatch_callbacks+0x100/0x100 [zfs]
[321540.061314]  thread_generic_wrapper+0x61/0x80 [spl]
[321540.061324]  ? __thread_exit+0x20/0x20 [spl]
[321540.061332]  kthread+0x127/0x150
[321540.061336]  ? set_kthread_struct+0x50/0x50
[321540.061339]  ret_from_fork+0x1f/0x30
[321540.061344]  </TASK>

Thank you again to anyone who takes the time to offer any info or advice on resolving this.

Most of the switching posts are from frustrated windows users making the jump. I’m already a Linux user on my server (Ubuntu for now, going Debian at some point) and a 2014 iMac for tinkering/testing (KDE Neon), and a couple of raspberry pis (raspberry pi os headless) but our main household computer is an M1 Mac mini that my wife and I both use.

Lately I’ve been super frustrated with macOS.

• First, macOS just refuses to mount my USB 3 drives. I have a 1T seagate ssd and a 3T WD hdd (both exFat) and it just flat out refuses to see them. The same drives are visible and mount just fine on my server and the KDE iMac. On macOS, they’re invisible. They don’t auto mount, and they don’t show up in disk utility (gui or shell), which is really fucking annoying when I’m trying to move large files between machines
• I use Cryptomator to encrypt data on macOS, and because of their whole walled garden shtick and how they continue to lock out system extensions, macfuse routinely breaks, rendering it impossible to access my data on macOS. Again, on the KDE iMac, everything just works as it should. On the Mac It’ll throw me the enable the extension warning, so I enable it. Then it tells me I have to re-boot to actually use the extension. I reboot, and it throws the enable extension warning again. Fucking infuriating.

I hadn’t already pulled the trigger on Asahi because my wife uses the m1 more than I do, and I didn’t want to break anything she does. However today was the last straw as a task that should have taken me maybe 15 minutes took two hours of fighting with macOS. After talking with her she gave me the go ahead to install Asahi. It helps that she does most everything in the browser and that the install is a dual boot setup with macOS still available.

I used to love macOS. It felt so intuitive and while it was never flawless, it mostly just got the fuck out of my way so I could do the things I wanted and needed to do. I still love a lot about Apple hardware, but fuck that shit os. I’m happy to be running Linux on all of the computers in the house.

Now I just have to learn the Fedora differences, having used Debian derivatives up until this point.